Buch, Englisch, 258 Seiten, Paperback, Format (B × H): 178 mm x 254 mm, Gewicht: 511 g
Reihe: Springer Protocols Handbooks
Genetic, Genomic and System Analyses of Pure Cultures
Buch, Englisch, 258 Seiten, Paperback, Format (B × H): 178 mm x 254 mm, Gewicht: 511 g
Reihe: Springer Protocols Handbooks
ISBN: 978-3-662-57059-3
Verlag: Springer
Hydrocarbon and Lipid Microbiology Protocols
There are tens of thousands of structurally different hydrocarbons, hydrocarbon derivatives and lipids, and a wide array of these molecules are required for cells to function. The global hydrocarbon cycle, which is largely driven by microorganisms, has a major impact on our environment and climate. Microbes are responsible for cleaning up the environmental pollution caused by the exploitation of hydrocarbon reservoirs and will also be pivotal in reducing our reliance on fossil fuels by providing biofuels, plastics and industrial chemicals. Gaining an understanding of the relevant functions of the wide range of microbes that produce, consume and modify hydrocarbons and related compounds will be key to responding to these challenges. This comprehensive collection of current and emerging protocols will facilitate acquisition of this understanding and exploitation of useful activities of such microbes.
Zielgruppe
Research
Autoren/Hrsg.
Fachgebiete
Weitere Infos & Material
Introduction.- Broadening the SEVA plasmid repertoire to facilitate genomic editing of Gram-negative bacteria.- Protocols on regulation of gene expression.- Ultra-high-throughput transposon scanning of bacterial genomes.- Knock-in-leave-behind (KILB): Genetic grafting of protease-cleaving sequences into permissive sites of proteins with a Tn5-based transposition system.- Deep sequencing to study microbial transcriptomic responses to hydrocarbon degradation/production/stress.- Shotgun proteomics for hydrocarbon microbiology.- Interactomic characterization of membrane-associated mega-complexes for the anaerobic respiration in Pseudomonas aeruginosa.- Lipidomic analysis of bacteria by thin layer chromatography and liquid chromatography/mass spectrometry.- Accurate microbial genome annotation using an integrated and user-friendly environment for community expertise of gene functions: the MicroScope platform.- Approaches for displaying complete transcriptomes of environmental bacteria.- A practical protocol for integration of transcriptomics data into genome-scale metabolic reconstructions.- GC-MS based determination of mass isotopomer distributions for 13C-based metabolic flux analysis.- Analysis of the hierarchical and metabolic regulation of flux through metabolic pathways.